Publications

 

The Biomathematics Research Group (BRG) at UGA explores mathematical and computational models that connect genes to ecology. Below is the list of publications produced by the members of the BRG. The corresponding author is indicated with a star (*). 

 
  1. Yi H. Yan, Diego M. Moncada, Elizabeth D. Trippe, Chester J. Joyner, Mary R. Galinski, Alberto Moreno, Jessica C. Kissinger, Rabindra Tirouvanziam, Juan B. Gutierrez, The MaHPIC Consortium. Correlates of severity of disease in Macaca mulatta infected with Plasmodium cynomolgi arXiv:1706.08139 [q-bio.TO]
     
  2. Derek Onken, Eric Marty, Roberto Palomares, Rui Xie, Leyao Zhang, Jonathan Arnold, Juan B. Gutierrez*. The lunar cycle's influence on sex determination at conception in humans.   2017.  arXiv:1706.08151 [q-bio.OT]
     
  3. Elizabeth D. Trippe, Jacob B. Aguilar, Yi H. Yan, Mustafa V. Nural, Jessica A. Brady, Mehdi Assefi, Saeid Safaei, Mehdi Allahyari, Seyedamin Pouriyeh, Mary R. Galinski, Jessica C. Kissinger, Juan B. Gutierrez*. A Vision for Health Informatics: Introducing the SKED Framework.An Extensible Architecture for Scientific Knowledge Extraction from Data. 2017.  arXiv:1706.07992 [q-bio.QM]
     
  4. Elizabeth D. Trippe, Jacob B. Aguilar, Yi H. Yan, Mustafa V. Nural, Jessica A. Brady, Juan B. Gutierrez*. Introducing Data Primitives: Data Formats for the SKED Framework. 2017. arXiv:1706.08131 [q-bio.QM]
     
  5. Yi H. Yan, Jacob Grey, Elizabeth D. Trippe, Juan B. Gutierrez*, The MaHPIC Consortium. Quantification of Healthy Red Blood Cell Removal and Preferential Invasion of Reticulocytes in Macaca mulatta during a Plasmodium cynomolgi Infection. arXiv:1706.08139 [q-bio.CB]
     
  6. Tseng, Wei-Chia, Mumingjiang Munisha, Juan B. Gutierrez, and Scott T. Dougan*. Establishment of the Vertebrate Germ Layers. In Vertebrate Development, pp. 307-381. Springer International Publishing, 2017. doi:10.1007/978-3-319-46095-6_7
     
  7. Yi H. Yan, Elizabeth D. Trippe, Juan B. Gutierrez*.  A Method for Massively Parallel Analysis of Time Series. 2016. arXiv:1612.08759  [q-bio.QM]
     
  8. Jacob B. Aguilar, Juan B. Gutierrez*. An Epidemiological Model of Malaria Accounting for Asymptomatic Carriers. 2016. arXiv:1611.04668 [q-bio.PE]
     
  9. Amanda N. Cameron, Matthew T. Houston, Juan B. Gutierrez*. A Review of Mathematical Models for Muscular Dystrophy: A Systems Biology Approach​. 2016. arXiv:1610.03521 [q-bio.QM]
     
  10. Yi Yan, Brian Adam, Alberto Moreno, Mary Galinski, Jessica Kissinger, Juan B. Gutierrez*. Mathematical model of susceptibility, resistance, and resilience in the within-host dynamics between a Plasmodium parasite and the immune system. Mathematical Biosciences. Volume 270, Part B, December 2015, Pages 213–223. doi:10.1016/j.mbs.2015.10.003
     
  11. Myriam Arévalo-Herrera, Mary Lopez-Perez, Luz Medina, Alberto Moreno, Juan B. Gutierrez, Sócrates Herrera*.  Clinical profile of Plasmodium falciparum and Plasmodium vivax infections in low and unstable malaria transmission settings of Colombia. Malaria Journal 2015, 14:154. doi:10.1186/s12936-015-0678-3
     
  12. Juan B. Gutierrez, Ming-Jun Lai*, George Slavov. Bivariate Spline Solution of Time Dependent Nonlinear PDE for a Population Density over Irregular Domains. Mathematical Biosciences. Volume 270, Part B, December 2015, Pages 263–277. doi:10.1016/j.mbs.2015.08.013
     
  13. Juan B. Gutierrez, Mary R. Galinski, Stephen Cantrell, Eberhard O. Voit*. From Within Host Dynamics to the Epidemiology of Infectious Disease: Scientific Overview and Challenges. Mathematical Biosciences. Volume 270, Part B, December 2015, Pages 143–155. doi:10.1016/j.mbs.2015.10.002
     
  14. Juan B. Gutierrez*, Omar S. Harb, Jie Zheng, Daniel J. Tisch, Edwin Charlebois, Christian J. Stoeckert Jr., and Deirdre A. Joy. A Framework for Global Collaborative Data Management in Malaria Research. Am J Trop Med Hyg. 2015 Sep 2; 93(3 Suppl): 124–132. doi:10.4269/ajtmh.15-0003
     
  15. Mary Lopez-Perez, Alvaro Alvarez, Juan B. Gutierrez, Alberto Moreno, Socrates Herrera and Myriam Arevalo-Herrera*. Malaria-Related anemia in patients from unstable transmission areas in Colombia. Am J Trop Med Hyg. 2015 Feb 4;92(2):294-301. doi:10.4269/ajtmh.14-0345
     
  16. DA Forero-Pena, P Chaparro, A Vallejo, Y Benavides, Juan B Gutierrez, M Arevalo-Herrera, and S Herrera*. Knowledge attitudes and practices on malaria in Colombia. Malar J. 2014 May 1;13:165. doi:10.1186/1475-2875-13-165.
     
  17. Juan B Gutierrez, S Kouachi, RD Parshad*. Global existence and asymptotic behavior of a model for biological control of invasive species via supermale introduction. Communications in Mathematical Sciences. 11(4):971-992 doi:10.4310/CMS.2013.v11.n4.a4
     
  18. JL Teem*, Juan B Gutierrez, RD Parshad. A Comparison of the Trojan Y Chromosome and Daughterless Carp Eradication Strategies. Biological Invasions, May 2013. doi:10.1007/s10530-013-0475-2.
     
  19. JL Teem*, Juan B Gutierrez. Combining the Trojan Y Chromosome and Daughterless Carp Eradication Strategies. Biological Invasions, May 2013. doi:10.1007/s10530-013-0476-1.
     
  20. S Herrera, ML Quiñones, JP Quintero, V Corredor, DO Fuller, JC Mateus, JE Calzada, Juan B Gutierrez, A Llanos, E Soto, C Menendez, Y Wu, P Alonso, G Carrasquilla, M Galinski, J Beier, M Arevalo-Herrera*. Prospects for malaria elimination in non-Amazonian regions of Latin America. Acta Tropica. Volume 121, issue 3 (March, 2012), p. 315-323. doi:10.1016/j.actatropica.2011.06.018
     
  21. Juan B. Gutierrez*, MK Hurdal, RD Parshad, JL Teem. Analysis of the Trojan Y Chromosome Model for Eradication of Invasive Species in a Dendritic Riverine System Journal of Mathematical Biology. Volume 64, Numbers 1-2 (2012), 319-340. doi:10.1007/s00285-011-0413-9
     
  22. RD Parshad*, Juan B Gutierrez. On the Well Posedness and Refined Estimates for the Global Attractor for the TYC model. Boundary Value Problems, vol. 2010, Article ID 405816, Nov. 2010. doi:10.1155/2010/405816
     
  23. RD Parshad*, Juan B Gutierrez. On the Global Attractor of the Trojan Y Chromosome Model. Communications in Pure and Applied Analysis, 10(10):339-359, January 2010. doi:10.3934/cpaa.2011.10.339
     
  24. MK Hurdal*, Juan B. Gutierrez, C Laing, DA Smith. Shape analysis for automated sulcal classification and parcellation of MRI data. Journal of Combinatorial Optimization, 15(3):257-275, 2008. doi:10.1007/s10878-007-9096-y
     
  25. Juan B. Gutierrez*, JL Teem. A model describing the effect of sex reversed YY fish in an established wild population: The use of a Trojan Y chromosome to cause extinction of an introduced exotic species. Journal of Theoretical Biology, 241(22):333-341, July 2006. doi:10.1016/j.jtbi.2005.11.032
  26. JL Teem*, Juan B. Gutierrez. A Theoretical Strategy for Eradication of Asian Carps Using a Trojan Y Chromosome to Shift the Sex Ratio of the Population. Chapter in Book: Invasive Carps in North America, Duane C. Chapman and Michael H. Hoff, editors. American Fisheries Society, AFS Symposium 74. June, 2011. ISBN: 978-1-934874-23-3
     
  27. MK Hurdal*, Juan B. Gutierrez, C Laing, AD Kline, and DA Smith. Geometric invariants for classification of cortical sulci. Proceedings of the IEEE International Conference on Image Processing, pages 1156-1159, San Diego, CA, October 2008. doi:10.1109/ICIP.2008.4711965